Human_Genes_Functions
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Prototype stage

Gene detail

Read-only gene view with summary, GO, UniProt, NCBI, and representative sequence links.

GRCh38.p14 + GENCODE Release 50local-onlyPDO SQLite primaryread-only query modesqlite3 fallback available

Gene detail

TAF1

TAF1

protein_coding X 71,366,129 - 71,532,374 PDO SQLite primary read-only query mode

Overview

Gene ID
ENSG00000147133
Gene type
protein_coding
Chromosome
X
Coordinates
71,366,129 - 71,532,374
Strand
+
Status
not available
NCBI summary UniProt GO Transcript FASTA Protein FASTA

Aliases

6872 BA2R CCDS14412 CCDS35325 CCG1 CCGS DYT3 DYT3/TAF1 ENST00000423759.6 KAT4 NM_004606 NM_004606.5 NSCL2 P21675 TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa TAF2A TAFII250 TATA box binding protein (TBP)-associated factor, RNA polymerase II, A, 250kD dystonia 3 (with Parkinsonism)

Summary

GENCODE gene_type=protein_coding; HGNC symbol=TAF1; HGNC name=TATA-box binding protein associated factor 1; alias_count=23; RefSeq=NM_004606; UniProt=P21675; MANE Select=ENST00000423759.6,NM_004606.5

Source: GENCODE + HGNC complete set

6872 • protein-coding

Initiation of transcription by RNA polymerase II requires the activities of more than 70 polypeptides. The protein that coordinates these activities is the basal transcription factor TFIID, which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the TATA-binding protein (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as coactivators, function in promoter recognition or modify general transcription factors (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes the largest subunit of TFIID. This subunit binds to core promoter sequences encompassing the transcription start site. It also binds to activators and other transcriptional regulators, and these interactions affect the rate of transcription initiation. This subunit contains two independent protein kinase domains at the N- and C-terminals, but also possesses acetyltransferase activity and can act as a ubiquitin-activating/conjugating enzyme. Mutations in this gene result in Dystonia 3, torsion, X-linked, a dystonia-parkinsonism disorder. Alternative splicing of this gene results in multiple transcript variants. This gene is part of a complex transcription unit (TAF1/DYT3), wherein some transcript variants share exons with TAF1 as well as additional downstream DYT3 exons. [provided by RefSeq, Oct 2013]

NCBI Gene

UniProt

P21675 • reviewed

The TFIID basal transcription factor complex plays a major role in the initiation of RNA polymerase II (Pol II)-dependent transcription (PubMed:33795473). TFIID recognizes and binds promoters with or without a TATA box via its subunit TBP, a TATA-box-binding protein, and promotes assembly of the pre-initiation complex (PIC) (PubMed:33795473). The TFIID complex consists of TBP and TBP-associated factors (TAFs), including TAF1, TAF2, TAF3, TAF4, TAF5, TAF6, TAF7, TAF8, TAF9, TAF10, TAF11, TAF12 and TAF13 (PubMed:33795473). TAF1 is the largest component and core scaffold of the TFIID complex, involved in nucleating complex assembly (PubMed:25412659, PubMed:27007846, PubMed:33795473). TAF1 forms a promoter DNA binding subcomplex of TFIID, together with TAF7 and TAF2 (PubMed:33795473). Contains novel N- and C-terminal Ser/Thr kinase domains which can autophosphorylate or transphosphorylate other transcription factors (PubMed:25412659, PubMed:8625415). Phosphorylates TP53 on 'Thr-55' which leads to MDM2-mediated degradation of TP53 (PubMed:25412659). Phosphorylates GTF2A1 and GTF2F1 on Ser residues (PubMed:25412659). Possesses DNA-binding activity (PubMed:25412659). Essential for progression of the G1 phase of the cell cycle (PubMed:11278496, PubMed:15053879, PubMed:2038334, PubMed:8450888, PubMed:8625415, PubMed:9660973, PubMed:9858607). Exhibits histone acetyltransferase activity towards histones H3 and H4 (PubMed:15870300)

Transcription initiation factor TFIID subunit 1 · Nucleus · EC 2.3.1.48; 2.7.11.1

P21675 • reviewed

The TFIID basal transcription factor complex plays a major role in the initiation of RNA polymerase II (Pol II)-dependent transcription (PubMed:33795473). TFIID recognizes and binds promoters with or without a TATA box via its subunit TBP, a TATA-box-binding protein, and promotes assembly of the pre-initiation complex (PIC) (PubMed:33795473). The TFIID complex consists of TBP and TBP-associated factors (TAFs), including TAF1, TAF2, TAF3, TAF4, TAF5, TAF6, TAF7, TAF8, TAF9, TAF10, TAF11, TAF12 and TAF13 (PubMed:33795473). TAF1 is the largest component and core scaffold of the TFIID complex, involved in nucleating complex assembly (PubMed:25412659, PubMed:27007846, PubMed:33795473). TAF1 forms a promoter DNA binding subcomplex of TFIID, together with TAF7 and TAF2 (PubMed:33795473). Contains novel N- and C-terminal Ser/Thr kinase domains which can autophosphorylate or transphosphorylate other transcription factors (PubMed:25412659, PubMed:8625415). Phosphorylates TP53 on 'Thr-55' which leads to MDM2-mediated degradation of TP53 (PubMed:25412659). Phosphorylates GTF2A1 and GTF2F1 on Ser residues (PubMed:25412659). Possesses DNA-binding activity (PubMed:25412659). Essential for progression of the G1 phase of the cell cycle (PubMed:11278496, PubMed:15053879, PubMed:2038334, PubMed:8450888, PubMed:8625415, PubMed:9660973, PubMed:9858607). Exhibits histone acetyltransferase activity towards histones H3 and H4 (PubMed:15870300)

Transcription initiation factor TFIID subunit 1 · Nucleus · EC 2.3.1.48; 2.7.11.1

P21675 • reviewed

The TFIID basal transcription factor complex plays a major role in the initiation of RNA polymerase II (Pol II)-dependent transcription (PubMed:33795473). TFIID recognizes and binds promoters with or without a TATA box via its subunit TBP, a TATA-box-binding protein, and promotes assembly of the pre-initiation complex (PIC) (PubMed:33795473). The TFIID complex consists of TBP and TBP-associated factors (TAFs), including TAF1, TAF2, TAF3, TAF4, TAF5, TAF6, TAF7, TAF8, TAF9, TAF10, TAF11, TAF12 and TAF13 (PubMed:33795473). TAF1 is the largest component and core scaffold of the TFIID complex, involved in nucleating complex assembly (PubMed:25412659, PubMed:27007846, PubMed:33795473). TAF1 forms a promoter DNA binding subcomplex of TFIID, together with TAF7 and TAF2 (PubMed:33795473). Contains novel N- and C-terminal Ser/Thr kinase domains which can autophosphorylate or transphosphorylate other transcription factors (PubMed:25412659, PubMed:8625415). Phosphorylates TP53 on 'Thr-55' which leads to MDM2-mediated degradation of TP53 (PubMed:25412659). Phosphorylates GTF2A1 and GTF2F1 on Ser residues (PubMed:25412659). Possesses DNA-binding activity (PubMed:25412659). Essential for progression of the G1 phase of the cell cycle (PubMed:11278496, PubMed:15053879, PubMed:2038334, PubMed:8450888, PubMed:8625415, PubMed:9660973, PubMed:9858607). Exhibits histone acetyltransferase activity towards histones H3 and H4 (PubMed:15870300)

Transcription initiation factor TFIID subunit 1 · Nucleus · EC 2.3.1.48; 2.7.11.1

GO annotations

Biological process
  • GO:0006974 DNA damage response (IDA)
  • GO:0006352 DNA-templated transcription initiation (IEA)
  • GO:0051123 RNA polymerase II preinitiation complex assembly (ISS)
  • GO:0051123 RNA polymerase II preinitiation complex assembly (IPI)
  • GO:0051123 RNA polymerase II preinitiation complex assembly (IBA)
  • GO:0071318 cellular response to ATP (IDA)
  • GO:0034644 cellular response to UV (IDA)
  • GO:0006325 chromatin organization (IEA)
  • GO:0006325 chromatin organization (IEA)
  • GO:0006325 chromatin organization (IEA)

+ 24 more

Cellular component
  • GO:0071339 MLL1 complex (IDA)
  • GO:0000785 chromatin (IDA)
  • GO:0000785 chromatin (IDA)
  • GO:0005730 nucleolus (IDA)
  • GO:0005654 nucleoplasm (IDA)
  • GO:0005654 nucleoplasm (IDA)
  • GO:0005654 nucleoplasm (TAS)
  • GO:0005654 nucleoplasm (TAS)
  • GO:0005654 nucleoplasm (TAS)
  • GO:0005654 nucleoplasm (TAS)

+ 32 more

Molecular function
  • GO:0003677 DNA binding (IEA)
  • GO:0001181 RNA polymerase I general transcription initiation factor activity (IDA)
  • GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding (IMP)
  • GO:0016251 RNA polymerase II general transcription initiation factor activity (IEA)
  • GO:0016251 RNA polymerase II general transcription initiation factor activity (IDA)
  • GO:0016251 RNA polymerase II general transcription initiation factor activity (IGI)
  • GO:0016251 RNA polymerase II general transcription initiation factor activity (IBA)
  • GO:0001091 RNA polymerase II general transcription initiation factor binding (IPI)
  • GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding (IPI)
  • GO:0017025 TBP-class protein binding (IEA)

+ 47 more

Representative

Representative transcript
ENST00000373790
Representative protein
ENSP00000362895.5
Representative type
CCDS
Candidate count
3

GENCODE Release 50 annotation GTF · transcript.tag=CCDS; transcript_support_level=1

Transcripts

Transcript ID Name Type Status Protein Location
ENST00000373790 TAF1-203 protein_coding not available ENSP00000362895.5 X:71,366,129 - 71,466,005 +
ENST00000683202 TAF1-221 protein_coding not available ENSP00000507781.1 X:71,366,129 - 71,464,924 +
ENST00000683782 TAF1-226 protein_coding not available ENSP00000506996.1 X:71,366,129 - 71,466,001 +
ENST00000945393 TAF1-229 protein_coding not available ENSP00000615452.1 X:71,366,129 - 71,466,004 +
ENST00001113521 TAF1-230 protein_coding not available ENSP00000783326.1 X:71,366,129 - 71,466,961 +
ENST00001125140 TAF1-231 protein_coding not available ENSP00000794945.1 X:71,366,129 - 71,367,340 +
ENST00000715246 TAF1-228 protein_coding not available ENSP00000520427.1 X:71,366,136 - 71,466,005 +
ENST00000483365 TAF1-216 retained_intron not available not available X:71,366,264 - 71,377,985 +
ENST00000683352 TAF1-222 protein_coding_CDS_not_defined not available not available X:71,366,305 - 71,380,409 +
ENST00000423759 TAF1-204 protein_coding not available ENSP00000406549.2 X:71,366,357 - 71,466,005 +
ENST00000683715 TAF1-225 nonsense_mediated_decay not available ENSP00000506729.1 X:71,375,234 - 71,394,096 +
ENST00000276072 TAF1-201 protein_coding not available ENSP00000276072.5 X:71,377,603 - 71,466,004 +
ENST00000683668 TAF1-224 nonsense_mediated_decay not available ENSP00000507280.1 X:71,377,603 - 71,530,361 +
ENST00000472567 TAF1-212 retained_intron not available not available X:71,387,086 - 71,388,301 +
ENST00000478305 TAF1-214 retained_intron not available not available X:71,387,310 - 71,389,773 +
ENST00000474917 TAF1-213 retained_intron not available not available X:71,388,589 - 71,389,630 +
ENST00000483985 TAF1-217 protein_coding not available ENSP00000424526.2 X:71,393,332 - 71,406,746 +
ENST00000463163 TAF1-209 protein_coding not available ENSP00000421611.1 X:71,406,646 - 71,416,737 +
ENST00000373775 TAF1-202 nonsense_mediated_decay not available ENSP00000362880.4 X:71,406,679 - 71,530,361 +
ENST00000437147 TAF1-205 nonsense_mediated_decay not available ENSP00000406517.4 X:71,406,679 - 71,530,360 +

FASTA

FASTA output is generated by backend query; the raw FASTA path is not exposed.

ClinVar disease associations

ClinVar disease associations: 0

ClinVar gene-disease tables are missing. Build the candidate database first.